Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Gm21524-201ENSMUST00000190499 696 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Gm21715-201ENSMUST00000191056 694 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.04□□□□□ -1.12
Col4a1P02463 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC8.04□□□□□ -1.12
Col4a1P02463 AC154595.2-201ENSMUST00000225067 310 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a1P02463 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Col4a1P02463 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a1P02463 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col4a1P02463 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Col4a1P02463 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 Gm24065-201ENSMUST00000157487 264 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Gm19060-201ENSMUST00000201959 421 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC8.03□□□□□ -1.12
Col4a1P02463 Gm19195-201ENSMUST00000222018 511 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col4a1P02463 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col4a1P02463 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.03□□□□□ -1.12
Col4a1P02463 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.03□□□□□ -1.12
Col4a1P02463 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col4a1P02463 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col4a1P02463 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col4a1P02463 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Col4a1P02463 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Col4a1P02463 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Col4a1P02463 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Gm8855-201ENSMUST00000118888 878 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Gm16269-201ENSMUST00000160532 409 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm6061-201ENSMUST00000175860 492 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm37265-201ENSMUST00000191698 885 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Gm36939-201ENSMUST00000194889 439 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC8.02□□□□□ -1.13
Col4a1P02463 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm18467-201ENSMUST00000208805 434 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Gm45734-201ENSMUST00000211916 411 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm8872-201ENSMUST00000197475 1341 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm38142-201ENSMUST00000194093 3555 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Col4a1P02463 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a1P02463 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col4a1P02463 Gm23910-201ENSMUST00000104597 132 ntBASIC8.02□□□□□ -1.13
Col4a1P02463 Gm8534-201ENSMUST00000118553 766 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms