Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Col2a1P28481 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm14000-201ENSMUST00000118670 233 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Gm14925-201ENSMUST00000120611 438 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Gm7212-201ENSMUST00000120817 348 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm23903-201ENSMUST00000157566 131 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm42799-201ENSMUST00000201331 328 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm2040-201ENSMUST00000202979 289 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col2a1P28481 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col2a1P28481 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.6□□□□□ -1.19
Col2a1P28481 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Col2a1P28481 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm14550-201ENSMUST00000117918 407 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm23884-201ENSMUST00000122687 294 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm23071-201ENSMUST00000158242 115 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm23343-201ENSMUST00000158964 143 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.59□□□□□ -1.19
Col2a1P28481 Mir5110-201ENSMUST00000175537 87 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm21728-201ENSMUST00000188442 695 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm21889-201ENSMUST00000188487 695 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm20932-201ENSMUST00000189115 694 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm28586-201ENSMUST00000189857 456 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm21920-201ENSMUST00000190042 695 ntBASIC7.59□□□□□ -1.19
Col2a1P28481 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.59□□□□□ -1.19
Col2a1P28481 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Col2a1P28481 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms