Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 CDV3P1-201ENST00000471403 739 ntBASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1G3Q9Y6M4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 DUSP5P2-201ENST00000426873 1033 ntBASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1G3Q9Y6M4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1G3Q9Y6M4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1G3Q9Y6M4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 LSM12P1-201ENST00000411836 588 ntBASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CSNK1G3Q9Y6M4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 AC080038.3-201ENST00000623346 1952 ntBASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 AC008687.6-201ENST00000596318 630 ntBASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CSNK1G3Q9Y6M4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1G3Q9Y6M4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CSNK1G3Q9Y6M4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms