Protein–RNA interactions for Protein: Q9WU78

Pdcd6ip, Programmed cell death 6-interacting protein, mousemouse

Known RBP Predictions only

Length 869 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdcd6ipQ9WU78 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pdcd6ipQ9WU78 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdcd6ipQ9WU78 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Gm715-201ENSMUST00000117865 831 ntBASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdcd6ipQ9WU78 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdcd6ipQ9WU78 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Gm11927-201ENSMUST00000118472 759 ntBASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pdcd6ipQ9WU78 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pdcd6ipQ9WU78 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdcd6ipQ9WU78 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdcd6ipQ9WU78 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdcd6ipQ9WU78 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdcd6ipQ9WU78 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Pdcd6ipQ9WU78 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdcd6ipQ9WU78 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdcd6ipQ9WU78 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.14■□□□□ 0.97
Pdcd6ipQ9WU78 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdcd6ipQ9WU78 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdcd6ipQ9WU78 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdcd6ipQ9WU78 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Gm22325-201ENSMUST00000158904 308 ntBASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdcd6ipQ9WU78 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms