Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 AC120498.10-201ENST00000621827 505 ntBASIC19.92■□□□□ 0.78
BRF2Q9HAW0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRF2Q9HAW0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4L2-201ENST00000561772 1275 ntBASIC19.91■□□□□ 0.78
BRF2Q9HAW0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4L6-201ENST00000626483 1275 ntBASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4L1-201ENST00000627662 1275 ntBASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4L8-201ENST00000629013 1275 ntBASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4L3-201ENST00000630187 1275 ntBASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4L7-201ENST00000630678 1275 ntBASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4L5-201ENST00000630834 1275 ntBASIC19.91■□□□□ 0.78
BRF2Q9HAW0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.91■□□□□ 0.78
BRF2Q9HAW0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 ZNRF2P3-201ENST00000424200 374 ntBASIC19.9■□□□□ 0.78
BRF2Q9HAW0 CCDC92B-201ENST00000575506 885 ntBASIC19.9■□□□□ 0.78
BRF2Q9HAW0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRF2Q9HAW0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.89■□□□□ 0.78
BRF2Q9HAW0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 AC011484.1-201ENST00000377652 1995 ntBASIC19.89■□□□□ 0.77
BRF2Q9HAW0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 KRT18P14-201ENST00000534205 1250 ntBASIC19.89■□□□□ 0.77
BRF2Q9HAW0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 AC104187.1-201ENST00000607510 612 ntBASIC19.89■□□□□ 0.77
BRF2Q9HAW0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRF2Q9HAW0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 624.7 ms