Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc96Q9CR92 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc96Q9CR92 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc96Q9CR92 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc96Q9CR92 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Ccdc96Q9CR92 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.77■□□□□ 0.91
Ccdc96Q9CR92 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Gm10653-202ENSMUST00000139570 835 ntBASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc96Q9CR92 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc96Q9CR92 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc96Q9CR92 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 BC021767-201ENSMUST00000126387 1716 ntBASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc96Q9CR92 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc96Q9CR92 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc96Q9CR92 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms