Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.8■□□□□ 0.92
Trim11Q99PQ2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim11Q99PQ2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim11Q99PQ2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim11Q99PQ2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim11Q99PQ2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim11Q99PQ2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim11Q99PQ2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim11Q99PQ2 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 AV356131-201ENSMUST00000206201 750 ntBASIC20.73■□□□□ 0.91
Trim11Q99PQ2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim11Q99PQ2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms