Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT9Q92600 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT9Q92600 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT9Q92600 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT9Q92600 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT9Q92600 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT9Q92600 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.16■□□□□ 0.66
CNOT9Q92600 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT9Q92600 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT9Q92600 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.16■□□□□ 0.66
CNOT9Q92600 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT9Q92600 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNOT9Q92600 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT9Q92600 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNOT9Q92600 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNOT9Q92600 AL121603.2-201ENST00000557373 2117 ntBASIC19.15■□□□□ 0.66
CNOT9Q92600 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
CNOT9Q92600 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.15■□□□□ 0.66
CNOT9Q92600 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CNOT9Q92600 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.15■□□□□ 0.66
CNOT9Q92600 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 AP004607.4-201ENST00000530158 1459 ntBASIC19.15■□□□□ 0.66
CNOT9Q92600 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT9Q92600 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
CNOT9Q92600 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CNOT9Q92600 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
CNOT9Q92600 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT9Q92600 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT9Q92600 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNOT9Q92600 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.14■□□□□ 0.65
CNOT9Q92600 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNOT9Q92600 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT9Q92600 KRT18P14-201ENST00000534205 1250 ntBASIC19.14■□□□□ 0.65
CNOT9Q92600 AC138907.5-202ENST00000569484 235 ntBASIC19.14■□□□□ 0.65
CNOT9Q92600 AC104187.1-201ENST00000607510 612 ntBASIC19.14■□□□□ 0.65
CNOT9Q92600 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNOT9Q92600 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNOT9Q92600 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNOT9Q92600 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.14■□□□□ 0.65
CNOT9Q92600 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNOT9Q92600 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.14■□□□□ 0.65
CNOT9Q92600 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNOT9Q92600 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT9Q92600 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT9Q92600 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT9Q92600 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.13■□□□□ 0.65
CNOT9Q92600 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT9Q92600 AC008175.2-201ENST00000612840 297 ntBASIC19.13■□□□□ 0.65
CNOT9Q92600 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CNOT9Q92600 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT9Q92600 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNOT9Q92600 PLK5-205ENST00000642079 1969 ntBASIC19.13■□□□□ 0.65
CNOT9Q92600 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CNOT9Q92600 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CNOT9Q92600 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CNOT9Q92600 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT9Q92600 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 POU5F1P4-201ENST00000413175 1085 ntBASIC19.12■□□□□ 0.65
CNOT9Q92600 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.12■□□□□ 0.65
CNOT9Q92600 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT9Q92600 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.12■□□□□ 0.65
CNOT9Q92600 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.12■□□□□ 0.65
CNOT9Q92600 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms