Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chrna3Q8R4G9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chrna3Q8R4G9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chrna3Q8R4G9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.89■□□□□ 0.46
Chrna3Q8R4G9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.89■□□□□ 0.46
Chrna3Q8R4G9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chrna3Q8R4G9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chrna3Q8R4G9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chrna3Q8R4G9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.88■□□□□ 0.45
Chrna3Q8R4G9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms