Protein–RNA interactions for Protein: Q8K3M1

Rdh16f2, Cis-retinol/3alpha hydroxysterol short-chain dehydrogenase-like protein, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f2Q8K3M1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh16f2Q8K3M1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Gm6433-201ENSMUST00000118634 875 ntBASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh16f2Q8K3M1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rdh16f2Q8K3M1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Gm9987-201ENSMUST00000069768 567 ntBASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Gm5417-201ENSMUST00000079706 384 ntBASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh16f2Q8K3M1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh16f2Q8K3M1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Gm15375-201ENSMUST00000119510 849 ntBASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rdh16f2Q8K3M1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Gm43799-201ENSMUST00000201845 579 ntBASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Iqck-206ENSMUST00000208658 2891 ntBASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rdh16f2Q8K3M1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Gm21814-202ENSMUST00000203277 873 ntBASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh16f2Q8K3M1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms