Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fam228aQ8CDW1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam228aQ8CDW1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Gm8493-201ENSMUST00000196881 489 ntBASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Gm43173-201ENSMUST00000202246 593 ntBASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam228aQ8CDW1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam228aQ8CDW1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Fam228aQ8CDW1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam228aQ8CDW1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam228aQ8CDW1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms