Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Pif1Q80SX8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.8■□□□□ 0.28
Pif1Q80SX8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.8■□□□□ 0.28
Pif1Q80SX8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pif1Q80SX8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.79■□□□□ 0.28
Pif1Q80SX8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pif1Q80SX8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pif1Q80SX8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Pif1Q80SX8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.78■□□□□ 0.28
Pif1Q80SX8 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.78■□□□□ 0.28
Pif1Q80SX8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pif1Q80SX8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pif1Q80SX8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pif1Q80SX8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.77■□□□□ 0.28
Pif1Q80SX8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pif1Q80SX8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pif1Q80SX8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.77■□□□□ 0.27
Pif1Q80SX8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.77■□□□□ 0.27
Pif1Q80SX8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pif1Q80SX8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pif1Q80SX8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pif1Q80SX8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.75■□□□□ 0.27
Pif1Q80SX8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.75■□□□□ 0.27
Pif1Q80SX8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms