Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Treml4Q3LRV9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Treml4Q3LRV9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.11■□□□□ 0.33
Treml4Q3LRV9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Gm9987-201ENSMUST00000069768 567 ntBASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Treml4Q3LRV9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.1■□□□□ 0.33
Treml4Q3LRV9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Gm6433-201ENSMUST00000118634 875 ntBASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Treml4Q3LRV9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
Treml4Q3LRV9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Treml4Q3LRV9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Treml4Q3LRV9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Treml4Q3LRV9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Treml4Q3LRV9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Treml4Q3LRV9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Treml4Q3LRV9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms