Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 YMR294W-AYMR294W-A 360 nt3.65□□□□□ -1.83
BRE1Q07457 RHO5YNL180C 996 nt3.65□□□□□ -1.83
BRE1Q07457 MPD2YOL088C 834 nt3.65□□□□□ -1.83
BRE1Q07457 ATP22YDR350C 2055 nt3.65□□□□□ -1.83
BRE1Q07457 YAP7YOL028C 738 nt3.64□□□□□ -1.83
BRE1Q07457 YDR210W-BYDR210W-B 5313 nt3.64□□□□□ -1.83
BRE1Q07457 YDR261W-BYDR261W-B 5313 nt3.64□□□□□ -1.83
BRE1Q07457 YFL002W-AYFL002W-A 5313 nt3.64□□□□□ -1.83
BRE1Q07457 YGR161W-BYGR161W-B 5313 nt3.64□□□□□ -1.83
BRE1Q07457 YLR410W-BYLR410W-B 5313 nt3.64□□□□□ -1.83
BRE1Q07457 YCL019WYCL019W 5313 nt3.64□□□□□ -1.83
BRE1Q07457 MED1YPR070W 1701 nt3.64□□□□□ -1.83
BRE1Q07457 NSA1YGL111W 1392 nt3.63□□□□□ -1.83
BRE1Q07457 AI2Q0055 2565 nt3.63□□□□□ -1.83
BRE1Q07457 MSH4YFL003C 2637 nt3.63□□□□□ -1.83
BRE1Q07457 PBP4YDL053C 558 nt3.63□□□□□ -1.83
BRE1Q07457 tF(GAA)DtF(GAA)D 73 nt3.63□□□□□ -1.83
BRE1Q07457 tF(GAA)NtF(GAA)N 73 nt3.63□□□□□ -1.83
BRE1Q07457 YDR461C-AYDR461C-A 243 nt3.63□□□□□ -1.83
BRE1Q07457 RPB9YGL070C 369 nt3.63□□□□□ -1.83
BRE1Q07457 SAE2YGL175C 1038 nt3.63□□□□□ -1.83
BRE1Q07457 YHR050W-AYHR050W-A 171 nt3.63□□□□□ -1.83
BRE1Q07457 PPX1YHR201C 1194 nt3.63□□□□□ -1.83
BRE1Q07457 RPL17AYKL180W 555 nt3.63□□□□□ -1.83
BRE1Q07457 CHS2YBR038W 2892 nt3.63□□□□□ -1.83
BRE1Q07457 YKL100CYKL100C 1764 nt3.63□□□□□ -1.83
BRE1Q07457 MUB1YMR100W 1863 nt3.62□□□□□ -1.83
BRE1Q07457 PUF6YDR496C 1971 nt3.62□□□□□ -1.83
BRE1Q07457 SLK19YOR195W 2466 nt3.62□□□□□ -1.83
BRE1Q07457 YCR045W-AYCR045W-A 351 nt3.62□□□□□ -1.83
BRE1Q07457 EMC4YGL231C 573 nt3.62□□□□□ -1.83
BRE1Q07457 YGR107WYGR107W 450 nt3.62□□□□□ -1.83
BRE1Q07457 DAL2YIR029W 1032 nt3.62□□□□□ -1.83
BRE1Q07457 GRE2YOL151W 1029 nt3.62□□□□□ -1.83
BRE1Q07457 SWD3YBR175W 948 nt3.62□□□□□ -1.83
BRE1Q07457 MBA1YBR185C 837 nt3.62□□□□□ -1.83
BRE1Q07457 FRE8YLR047C 2061 nt3.62□□□□□ -1.83
BRE1Q07457 PEX5YDR244W 1839 nt3.62□□□□□ -1.83
BRE1Q07457 YCT1YLL055W 1596 nt3.62□□□□□ -1.83
BRE1Q07457 TSC11YER093C 4293 nt3.62□□□□□ -1.83
BRE1Q07457 PAM1YDR251W 2493 nt3.62□□□□□ -1.83
BRE1Q07457 LST4YKL176C 2487 nt3.62□□□□□ -1.83
BRE1Q07457 CWH41YGL027C 2502 nt3.62□□□□□ -1.83
BRE1Q07457 RIM13YMR154C 2184 nt3.61□□□□□ -1.83
BRE1Q07457 OCA6YDR067C 675 nt3.61□□□□□ -1.83
BRE1Q07457 HLR1YDR528W 1272 nt3.61□□□□□ -1.83
BRE1Q07457 YFL065CYFL065C 309 nt3.61□□□□□ -1.83
BRE1Q07457 YLR257WYLR257W 966 nt3.61□□□□□ -1.83
BRE1Q07457 YBL039W-BYBL039W-B 180 nt3.61□□□□□ -1.83
BRE1Q07457 YMR316C-AYMR316C-A 312 nt3.61□□□□□ -1.83
BRE1Q07457 YNL203CYNL203C 612 nt3.61□□□□□ -1.83
BRE1Q07457 YDR061WYDR061W 1620 nt3.61□□□□□ -1.83
BRE1Q07457 UBX3YDL091C 1368 nt3.61□□□□□ -1.83
BRE1Q07457 DSE4YNR067C 3354 nt3.6□□□□□ -1.83
BRE1Q07457 snR5snR5 204 nt3.6□□□□□ -1.83
BRE1Q07457 YDR442WYDR442W 393 nt3.6□□□□□ -1.83
BRE1Q07457 NSA2YER126C 786 nt3.6□□□□□ -1.83
BRE1Q07457 ECO1YFR027W 846 nt3.6□□□□□ -1.83
BRE1Q07457 LSM8YJR022W 330 nt3.6□□□□□ -1.83
BRE1Q07457 CUR1YPR158W 759 nt3.6□□□□□ -1.83
BRE1Q07457 MET5YJR137C 4329 nt3.6□□□□□ -1.83
BRE1Q07457 MFB1YDR219C 1398 nt3.6□□□□□ -1.83
BRE1Q07457 NTF2YER009W 378 nt3.59□□□□□ -1.83
BRE1Q07457 YGR109W-AYGR109W-A 873 nt3.59□□□□□ -1.83
BRE1Q07457 YIL082WYIL082W 873 nt3.59□□□□□ -1.83
BRE1Q07457 DYN3YMR299C 939 nt3.59□□□□□ -1.83
BRE1Q07457 AFT2YPL202C 1251 nt3.59□□□□□ -1.83
BRE1Q07457 SKO1YNL167C 1944 nt3.59□□□□□ -1.83
BRE1Q07457 SRD1YCR018C 666 nt3.58□□□□□ -1.84
BRE1Q07457 YDR262WYDR262W 819 nt3.58□□□□□ -1.84
BRE1Q07457 VMA21YGR105W 234 nt3.58□□□□□ -1.84
BRE1Q07457 MVB12YGR206W 306 nt3.58□□□□□ -1.84
BRE1Q07457 GMC2YLR445W 567 nt3.58□□□□□ -1.84
BRE1Q07457 VMA6YLR447C 1038 nt3.58□□□□□ -1.84
BRE1Q07457 CSM4YPL200W 471 nt3.58□□□□□ -1.84
BRE1Q07457 SEC66YBR171W 621 nt3.58□□□□□ -1.84
BRE1Q07457 ITC1YGL133W 3795 nt3.58□□□□□ -1.84
BRE1Q07457 DSF2YBR007C 2211 nt3.58□□□□□ -1.84
BRE1Q07457 FLO1YAR050W 4614 nt3.58□□□□□ -1.84
BRE1Q07457 NMD2YHR077C 3270 nt3.57□□□□□ -1.84
BRE1Q07457 PPH3YDR075W 927 nt3.57□□□□□ -1.84
BRE1Q07457 tC(GCA)BtC(GCA)B 72 nt3.57□□□□□ -1.84
BRE1Q07457 tC(GCA)GtC(GCA)G 72 nt3.57□□□□□ -1.84
BRE1Q07457 tC(GCA)P1tC(GCA)P1 72 nt3.57□□□□□ -1.84
BRE1Q07457 tC(GCA)P2tC(GCA)P2 72 nt3.57□□□□□ -1.84
BRE1Q07457 TMA20YER007C-A 546 nt3.57□□□□□ -1.84
BRE1Q07457 YER066C-AYER066C-A 501 nt3.57□□□□□ -1.84
BRE1Q07457 YIL175WYIL175W 318 nt3.57□□□□□ -1.84
BRE1Q07457 YJL222W-BYJL222W-B 138 nt3.57□□□□□ -1.84
BRE1Q07457 SFT1YKL006C-A 294 nt3.57□□□□□ -1.84
BRE1Q07457 YKL023C-AYKL023C-A 228 nt3.57□□□□□ -1.84
BRE1Q07457 YET1YKL065C 621 nt3.57□□□□□ -1.84
BRE1Q07457 DAD2YKR083C 402 nt3.57□□□□□ -1.84
BRE1Q07457 VPS63YLR261C 327 nt3.57□□□□□ -1.84
BRE1Q07457 RPL16BYNL069C 597 nt3.57□□□□□ -1.84
BRE1Q07457 FAA2YER015W 2235 nt3.56□□□□□ -1.84
BRE1Q07457 FRE2YKL220C 2136 nt3.56□□□□□ -1.84
BRE1Q07457 VHR2YER064C 1518 nt3.56□□□□□ -1.84
BRE1Q07457 BRE5YNR051C 1548 nt3.56□□□□□ -1.84
BRE1Q07457 YSP2YDR326C 4317 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms