Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX6-1P78426 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
NKX6-1P78426 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
NKX6-1P78426 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 AF201337.1-201ENST00000520239 748 ntBASIC18.31■□□□□ 0.52
NKX6-1P78426 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NKX6-1P78426 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX6-1P78426 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.31■□□□□ 0.52
NKX6-1P78426 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NKX6-1P78426 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.3■□□□□ 0.52
NKX6-1P78426 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.3■□□□□ 0.52
NKX6-1P78426 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.3■□□□□ 0.52
NKX6-1P78426 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
NKX6-1P78426 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX6-1P78426 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX6-1P78426 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX6-1P78426 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.29■□□□□ 0.52
NKX6-1P78426 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.29■□□□□ 0.52
NKX6-1P78426 AC138907.5-202ENST00000569484 235 ntBASIC18.29■□□□□ 0.52
NKX6-1P78426 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NKX6-1P78426 AC053503.5-201ENST00000601508 636 ntBASIC18.29■□□□□ 0.52
NKX6-1P78426 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 AL121603.2-201ENST00000557373 2117 ntBASIC18.29■□□□□ 0.52
NKX6-1P78426 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX6-1P78426 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX6-1P78426 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.28■□□□□ 0.52
NKX6-1P78426 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NKX6-1P78426 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.28■□□□□ 0.52
NKX6-1P78426 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.28■□□□□ 0.52
NKX6-1P78426 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 AC105036.2-201ENST00000569468 176 ntBASIC18.28■□□□□ 0.52
NKX6-1P78426 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.28■□□□□ 0.52
NKX6-1P78426 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 MYCNOS-205ENST00000641950 531 ntBASIC18.28■□□□□ 0.52
NKX6-1P78426 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.28■□□□□ 0.52
NKX6-1P78426 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NKX6-1P78426 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.28■□□□□ 0.52
NKX6-1P78426 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.28■□□□□ 0.52
NKX6-1P78426 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX6-1P78426 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.28■□□□□ 0.52
NKX6-1P78426 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
NKX6-1P78426 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 AC003102.1-202ENST00000563394 1796 ntBASIC18.27■□□□□ 0.52
NKX6-1P78426 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NKX6-1P78426 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NKX6-1P78426 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NKX6-1P78426 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.27■□□□□ 0.52
NKX6-1P78426 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
NKX6-1P78426 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NKX6-1P78426 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.27■□□□□ 0.52
NKX6-1P78426 AC073210.2-201ENST00000430369 194 ntBASIC18.27■□□□□ 0.52
NKX6-1P78426 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.27■□□□□ 0.52
NKX6-1P78426 AC010141.2-201ENST00000452426 721 ntBASIC18.27■□□□□ 0.52
NKX6-1P78426 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX6-1P78426 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
NKX6-1P78426 AC008687.6-201ENST00000596318 630 ntBASIC18.27■□□□□ 0.52
NKX6-1P78426 AP001160.3-201ENST00000601484 763 ntBASIC18.27■□□□□ 0.52
NKX6-1P78426 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.27■□□□□ 0.52
NKX6-1P78426 FAM99A-202ENST00000538190 1989 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms