Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.13□□□□□ -0.15
Vamp3P63024 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.13□□□□□ -0.15
Vamp3P63024 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.13□□□□□ -0.15
Vamp3P63024 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.13□□□□□ -0.15
Vamp3P63024 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.13□□□□□ -0.15
Vamp3P63024 Gm44428-201ENSMUST00000204474 874 ntBASIC14.13□□□□□ -0.15
Vamp3P63024 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vamp3P63024 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vamp3P63024 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.13□□□□□ -0.15
Vamp3P63024 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp3P63024 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.12□□□□□ -0.15
Vamp3P63024 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.12□□□□□ -0.15
Vamp3P63024 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.12□□□□□ -0.15
Vamp3P63024 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.12□□□□□ -0.15
Vamp3P63024 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vamp3P63024 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.11□□□□□ -0.15
Vamp3P63024 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.11□□□□□ -0.15
Vamp3P63024 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vamp3P63024 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vamp3P63024 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.1□□□□□ -0.15
Vamp3P63024 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vamp3P63024 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.1□□□□□ -0.15
Vamp3P63024 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vamp3P63024 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp3P63024 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vamp3P63024 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Vamp3P63024 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vamp3P63024 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vamp3P63024 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vamp3P63024 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp3P63024 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms