Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hmga2P52927 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.54■□□□□ 0.08
Hmga2P52927 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Hmga2P52927 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.54■□□□□ 0.08
Hmga2P52927 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Hmga2P52927 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Hmga2P52927 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Hmga2P52927 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.54■□□□□ 0.08
Hmga2P52927 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmga2P52927 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Hmga2P52927 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.53■□□□□ 0.08
Hmga2P52927 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.53■□□□□ 0.08
Hmga2P52927 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hmga2P52927 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmga2P52927 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Hmga2P52927 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Hmga2P52927 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmga2P52927 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Hmga2P52927 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.52■□□□□ 0.07
Hmga2P52927 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmga2P52927 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmga2P52927 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmga2P52927 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmga2P52927 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmga2P52927 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmga2P52927 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmga2P52927 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Hmga2P52927 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.52■□□□□ 0.07
Hmga2P52927 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.51■□□□□ 0.07
Hmga2P52927 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Hmga2P52927 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.51■□□□□ 0.07
Hmga2P52927 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmga2P52927 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.5■□□□□ 0.07
Hmga2P52927 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Hmga2P52927 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Hmga2P52927 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.5■□□□□ 0.07
Hmga2P52927 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.5■□□□□ 0.07
Hmga2P52927 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmga2P52927 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms