Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rom1P32958 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rom1P32958 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rom1P32958 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rom1P32958 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rom1P32958 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rom1P32958 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rom1P32958 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rom1P32958 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.47□□□□□ -0.09
Rom1P32958 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.47□□□□□ -0.09
Rom1P32958 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.47□□□□□ -0.09
Rom1P32958 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rom1P32958 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rom1P32958 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rom1P32958 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rom1P32958 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Rom1P32958 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Rom1P32958 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Rom1P32958 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.46□□□□□ -0.09
Rom1P32958 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.46□□□□□ -0.09
Rom1P32958 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.46□□□□□ -0.09
Rom1P32958 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.46□□□□□ -0.09
Rom1P32958 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rom1P32958 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rom1P32958 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.1
Rom1P32958 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rom1P32958 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Rom1P32958 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rom1P32958 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rom1P32958 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rom1P32958 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Rom1P32958 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rom1P32958 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rom1P32958 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rom1P32958 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.43□□□□□ -0.1
Rom1P32958 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.43□□□□□ -0.1
Rom1P32958 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Gm15820-201ENSMUST00000201566 728 ntBASIC14.43□□□□□ -0.1
Rom1P32958 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.43□□□□□ -0.1
Rom1P32958 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rom1P32958 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rom1P32958 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms