Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 YLR224WYLR224W 1110 nt2.08□□□□□ -2.08
XRN1P22147 HOP1YIL072W 1818 nt2.08□□□□□ -2.08
XRN1P22147 AAR2YBL074C 1068 nt2.07□□□□□ -2.08
XRN1P22147 IRA2YOL081W 9240 nt2.07□□□□□ -2.08
XRN1P22147 YCR050CYCR050C 309 nt2.07□□□□□ -2.08
XRN1P22147 KXD1YGL079W 657 nt2.07□□□□□ -2.08
XRN1P22147 ERP1YAR002C-A 660 nt2.07□□□□□ -2.08
XRN1P22147 IST1YNL265C 897 nt2.07□□□□□ -2.08
XRN1P22147 CTP1YBR291C 900 nt2.07□□□□□ -2.08
XRN1P22147 UTP5YDR398W 1932 nt2.06□□□□□ -2.08
XRN1P22147 EAF5YEL018W 840 nt2.06□□□□□ -2.08
XRN1P22147 YOR292CYOR292C 930 nt2.06□□□□□ -2.08
XRN1P22147 USO1YDL058W 5373 nt2.05□□□□□ -2.08
XRN1P22147 CTH1YDR151C 978 nt2.05□□□□□ -2.08
XRN1P22147 YER067C-AYER067C-A 324 nt2.05□□□□□ -2.08
XRN1P22147 COG2YGR120C 789 nt2.05□□□□□ -2.08
XRN1P22147 MRPL9YGR220C 810 nt2.05□□□□□ -2.08
XRN1P22147 EST3YIL009C-A 546 nt2.05□□□□□ -2.08
XRN1P22147 CTK2YJL006C 972 nt2.05□□□□□ -2.08
XRN1P22147 TAF14YPL129W 735 nt2.04□□□□□ -2.08
XRN1P22147 MRE11YMR224C 2079 nt2.03□□□□□ -2.08
XRN1P22147 MIG2YGL209W 1149 nt2.03□□□□□ -2.08
XRN1P22147 DCG1YIR030C 735 nt2.03□□□□□ -2.08
XRN1P22147 tF(GAA)BtF(GAA)B 73 nt2.02□□□□□ -2.09
XRN1P22147 tF(GAA)FtF(GAA)F 73 nt2.02□□□□□ -2.09
XRN1P22147 tF(GAA)GtF(GAA)G 73 nt2.02□□□□□ -2.09
XRN1P22147 tF(GAA)H1tF(GAA)H1 73 nt2.02□□□□□ -2.09
XRN1P22147 tF(GAA)H2tF(GAA)H2 73 nt2.02□□□□□ -2.09
XRN1P22147 tF(GAA)MtF(GAA)M 73 nt2.02□□□□□ -2.09
XRN1P22147 tF(GAA)P1tF(GAA)P1 73 nt2.02□□□□□ -2.09
XRN1P22147 tF(GAA)P2tF(GAA)P2 73 nt2.02□□□□□ -2.09
XRN1P22147 CDC25YLR310C 4770 nt2.02□□□□□ -2.09
XRN1P22147 CCM1YGR150C 2595 nt2.02□□□□□ -2.09
XRN1P22147 tV(UAC)BtV(UAC)B 74 nt2.01□□□□□ -2.09
XRN1P22147 tV(UAC)DtV(UAC)D 74 nt2.01□□□□□ -2.09
XRN1P22147 MBA1YBR185C 837 nt2.01□□□□□ -2.09
XRN1P22147 KCS1YDR017C 3153 nt2.01□□□□□ -2.09
XRN1P22147 YRR1YOR162C 2433 nt2.01□□□□□ -2.09
XRN1P22147 ARP10YDR106W 855 nt2.01□□□□□ -2.09
XRN1P22147 YIL156W-AYIL156W-A 402 nt2.01□□□□□ -2.09
XRN1P22147 UTP6YDR449C 1323 nt2□□□□□ -2.09
XRN1P22147 MIG1YGL035C 1515 nt2□□□□□ -2.09
XRN1P22147 UTP20YBL004W 7482 nt2□□□□□ -2.09
XRN1P22147 SMP3YOR149C 1551 nt2□□□□□ -2.09
XRN1P22147 NPR1YNL183C 2373 nt1.99□□□□□ -2.09
XRN1P22147 FIG2YCR089W 4830 nt1.99□□□□□ -2.09
XRN1P22147 YGL069CYGL069C 465 nt1.99□□□□□ -2.09
XRN1P22147 YBL073WYBL073W 312 nt1.99□□□□□ -2.09
XRN1P22147 VPS38YLR360W 1320 nt1.99□□□□□ -2.09
XRN1P22147 YOR192C-BYOR192C-B 5313 nt1.99□□□□□ -2.09
XRN1P22147 VPS15YBR097W 4365 nt1.98□□□□□ -2.09
XRN1P22147 YOL162WYOL162W 648 nt1.98□□□□□ -2.09
XRN1P22147 RPL33BYOR234C 324 nt1.98□□□□□ -2.09
XRN1P22147 MRPL27YBR282W 441 nt1.98□□□□□ -2.09
XRN1P22147 ZRG17YNR039C 1818 nt1.98□□□□□ -2.09
XRN1P22147 YHR214C-CYHR214C-C 1437 nt1.97□□□□□ -2.09
XRN1P22147 CDC53YDL132W 2448 nt1.97□□□□□ -2.09
XRN1P22147 YMR247W-AYMR247W-A 144 nt1.97□□□□□ -2.09
XRN1P22147 YJR003CYJR003C 1560 nt1.97□□□□□ -2.09
XRN1P22147 MAD1YGL086W 2250 nt1.97□□□□□ -2.09
XRN1P22147 OCT1YKL134C 2319 nt1.97□□□□□ -2.09
XRN1P22147 YLR154W-AYLR154W-A 186 nt1.96□□□□□ -2.09
XRN1P22147 RNA1YMR235C 1224 nt1.96□□□□□ -2.09
XRN1P22147 EAF1YDR359C 2949 nt1.96□□□□□ -2.09
XRN1P22147 NUP157YER105C 4176 nt1.96□□□□□ -2.1
XRN1P22147 YOR093CYOR093C 4947 nt1.96□□□□□ -2.1
XRN1P22147 CBP6YBR120C 489 nt1.96□□□□□ -2.1
XRN1P22147 MIC60YKR016W 1623 nt1.95□□□□□ -2.1
XRN1P22147 ALE1YOR175C 1860 nt1.95□□□□□ -2.1
XRN1P22147 FRQ1YDR373W 573 nt1.95□□□□□ -2.1
XRN1P22147 YBR174CYBR174C 315 nt1.95□□□□□ -2.1
XRN1P22147 MMS22YLR320W 4365 nt1.95□□□□□ -2.1
XRN1P22147 DBP5YOR046C 1449 nt1.94□□□□□ -2.1
XRN1P22147 AFI1YOR129C 2682 nt1.94□□□□□ -2.1
XRN1P22147 YIL142C-AYIL142C-A 333 nt1.94□□□□□ -2.1
XRN1P22147 HAL1YPR005C 885 nt1.94□□□□□ -2.1
XRN1P22147 INP51YIL002C 2841 nt1.94□□□□□ -2.1
XRN1P22147 PRM2YIL037C 1971 nt1.94□□□□□ -2.1
XRN1P22147 IPT1YDR072C 1584 nt1.94□□□□□ -2.1
XRN1P22147 TOM70YNL121C 1854 nt1.93□□□□□ -2.1
XRN1P22147 VMR1YHL035C 4779 nt1.93□□□□□ -2.1
XRN1P22147 YER085CYER085C 522 nt1.92□□□□□ -2.1
XRN1P22147 HCH1YNL281W 462 nt1.92□□□□□ -2.1
XRN1P22147 SPS2YDR522C 1509 nt1.92□□□□□ -2.1
XRN1P22147 STP1YDR463W 1560 nt1.92□□□□□ -2.1
XRN1P22147 GCN2YDR283C 4980 nt1.92□□□□□ -2.1
XRN1P22147 YEL1YBL060W 2064 nt1.92□□□□□ -2.1
XRN1P22147 RKM1YPL208W 1752 nt1.92□□□□□ -2.1
XRN1P22147 YCK3YER123W 1575 nt1.92□□□□□ -2.1
XRN1P22147 IOC4YMR044W 1428 nt1.92□□□□□ -2.1
XRN1P22147 FMP48YGR052W 1110 nt1.91□□□□□ -2.1
XRN1P22147 MPD2YOL088C 834 nt1.91□□□□□ -2.1
XRN1P22147 PMD1YER132C 5262 nt1.91□□□□□ -2.1
XRN1P22147 RLI1YDR091C 1827 nt1.91□□□□□ -2.1
XRN1P22147 ARG2YJL071W 1725 nt1.91□□□□□ -2.1
XRN1P22147 UBP16YPL072W 1500 nt1.91□□□□□ -2.1
XRN1P22147 YCR087C-AYCR087C-A 462 nt1.91□□□□□ -2.1
XRN1P22147 YGR111WYGR111W 1203 nt1.91□□□□□ -2.1
XRN1P22147 SPC3YLR066W 555 nt1.91□□□□□ -2.1
XRN1P22147 REG1YDR028C 3045 nt1.9□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms