Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FEM1AP4-201ENST00000443167 1987 ntBASIC20.04■□□□□ 0.8
SNRNP200O75643 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP200O75643 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.04■□□□□ 0.8
SNRNP200O75643 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP200O75643 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.04■□□□□ 0.8
SNRNP200O75643 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.04■□□□□ 0.8
SNRNP200O75643 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP200O75643 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.04■□□□□ 0.8
SNRNP200O75643 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.04■□□□□ 0.8
SNRNP200O75643 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SNRNP200O75643 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.04■□□□□ 0.8
SNRNP200O75643 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.04■□□□□ 0.8
SNRNP200O75643 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.04■□□□□ 0.8
SNRNP200O75643 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SNRNP200O75643 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP200O75643 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.04■□□□□ 0.8
SNRNP200O75643 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP200O75643 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.04■□□□□ 0.8
SNRNP200O75643 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP200O75643 SLC7A5P1-201ENST00000568957 537 ntBASIC20.03■□□□□ 0.8
SNRNP200O75643 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP200O75643 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP200O75643 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP200O75643 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SNRNP200O75643 AC243732.1-201ENST00000612648 864 ntBASIC20.03■□□□□ 0.8
SNRNP200O75643 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP200O75643 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP200O75643 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP200O75643 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP200O75643 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP200O75643 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP200O75643 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.02■□□□□ 0.8
SNRNP200O75643 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP200O75643 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.02■□□□□ 0.8
SNRNP200O75643 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP200O75643 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNRNP200O75643 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.02■□□□□ 0.79
SNRNP200O75643 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNRNP200O75643 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNRNP200O75643 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SNRNP200O75643 AC091799.1-201ENST00000422823 811 ntBASIC20.02■□□□□ 0.79
SNRNP200O75643 AC007322.1-201ENST00000426983 750 ntBASIC20.02■□□□□ 0.79
SNRNP200O75643 NCF1B-203ENST00000435988 1254 ntBASIC20.02■□□□□ 0.79
SNRNP200O75643 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.02■□□□□ 0.79
SNRNP200O75643 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.02■□□□□ 0.79
SNRNP200O75643 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.02■□□□□ 0.79
SNRNP200O75643 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.02■□□□□ 0.79
SNRNP200O75643 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SNRNP200O75643 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SNRNP200O75643 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP200O75643 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.01■□□□□ 0.79
SNRNP200O75643 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP200O75643 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.01■□□□□ 0.79
SNRNP200O75643 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP200O75643 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP200O75643 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.01■□□□□ 0.79
SNRNP200O75643 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP200O75643 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.01■□□□□ 0.79
SNRNP200O75643 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP200O75643 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
SNRNP200O75643 AC007375.3-201ENST00000600936 2314 ntBASIC20.01■□□□□ 0.79
SNRNP200O75643 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNRNP200O75643 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP200O75643 AC245052.3-201ENST00000450182 901 ntBASIC20■□□□□ 0.79
SNRNP200O75643 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20■□□□□ 0.79
SNRNP200O75643 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20■□□□□ 0.79
SNRNP200O75643 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNRNP200O75643 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNRNP200O75643 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP200O75643 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP200O75643 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SNRNP200O75643 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNRNP200O75643 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNRNP200O75643 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP200O75643 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SNRNP200O75643 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20■□□□□ 0.79
SNRNP200O75643 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP200O75643 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.99■□□□□ 0.79
SNRNP200O75643 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 AC006970.2-201ENST00000450065 779 ntBASIC19.99■□□□□ 0.79
SNRNP200O75643 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 AL162412.1-201ENST00000567129 965 ntBASIC19.99■□□□□ 0.79
SNRNP200O75643 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.99■□□□□ 0.79
SNRNP200O75643 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 AC104771.1-201ENST00000603335 964 ntBASIC19.99■□□□□ 0.79
SNRNP200O75643 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SNRNP200O75643 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.99■□□□□ 0.79
SNRNP200O75643 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.99■□□□□ 0.79
SNRNP200O75643 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRNP200O75643 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNRNP200O75643 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SNRNP200O75643 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms