Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgceO70258 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SgceO70258 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.31■□□□□ 0.2
SgceO70258 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.31■□□□□ 0.2
SgceO70258 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SgceO70258 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SgceO70258 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SgceO70258 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SgceO70258 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.31■□□□□ 0.2
SgceO70258 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.31■□□□□ 0.2
SgceO70258 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SgceO70258 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgceO70258 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.3■□□□□ 0.2
SgceO70258 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.3■□□□□ 0.2
SgceO70258 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgceO70258 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.29■□□□□ 0.2
SgceO70258 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SgceO70258 Gm7514-201ENSMUST00000209475 934 ntBASIC16.29■□□□□ 0.2
SgceO70258 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.29■□□□□ 0.2
SgceO70258 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SgceO70258 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SgceO70258 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.28■□□□□ 0.2
SgceO70258 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.28■□□□□ 0.2
SgceO70258 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SgceO70258 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgceO70258 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 AV356131-201ENSMUST00000206201 750 ntBASIC16.27■□□□□ 0.2
SgceO70258 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.27■□□□□ 0.2
SgceO70258 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.27■□□□□ 0.2
SgceO70258 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgceO70258 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgceO70258 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgceO70258 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SgceO70258 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgceO70258 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgceO70258 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SgceO70258 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.26■□□□□ 0.19
SgceO70258 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgceO70258 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SgceO70258 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgceO70258 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgceO70258 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SgceO70258 Gm6420-201ENSMUST00000193885 723 ntBASIC16.26■□□□□ 0.19
SgceO70258 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgceO70258 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgceO70258 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgceO70258 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms