Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn1aA2APX8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn1aA2APX8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn1aA2APX8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn1aA2APX8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Scn1aA2APX8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.2■□□□□ 0.66
Scn1aA2APX8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.2■□□□□ 0.66
Scn1aA2APX8 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.2■□□□□ 0.66
Scn1aA2APX8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Gm18025-201ENSMUST00000221733 862 ntBASIC19.2■□□□□ 0.66
Scn1aA2APX8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Scn1aA2APX8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn1aA2APX8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn1aA2APX8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scn1aA2APX8 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.19■□□□□ 0.66
Scn1aA2APX8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn1aA2APX8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn1aA2APX8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn1aA2APX8 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.19■□□□□ 0.66
Scn1aA2APX8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.18■□□□□ 0.66
Scn1aA2APX8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scn1aA2APX8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Tgds-204ENSMUST00000228543 1594 ntBASIC19.17■□□□□ 0.66
Scn1aA2APX8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn1aA2APX8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.17■□□□□ 0.66
Scn1aA2APX8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.17■□□□□ 0.66
Scn1aA2APX8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.16■□□□□ 0.66
Scn1aA2APX8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn1aA2APX8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Gm15378-201ENSMUST00000121894 207 ntBASIC19.15■□□□□ 0.66
Scn1aA2APX8 Gm18666-201ENSMUST00000190039 958 ntBASIC19.15■□□□□ 0.66
Scn1aA2APX8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Gm15375-201ENSMUST00000119510 849 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms