Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ap3s1-204ENSMUST00000225520 957 ntBASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Gm26571-201ENSMUST00000181399 666 ntBASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv17A0A140T8P8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Gm6420-201ENSMUST00000193885 723 ntBASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv17A0A140T8P8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Nespas-201ENSMUST00000143738 1083 ntBASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 BC021767-201ENSMUST00000126387 1716 ntBASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv17A0A140T8P8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Gm13534-201ENSMUST00000121169 513 ntBASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbv17A0A140T8P8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms