Protein–RNA interactions for Protein: Q9JLB9

Nectin3, Nectin-3, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nectin3Q9JLB9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nectin3Q9JLB9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nectin3Q9JLB9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nectin3Q9JLB9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nectin3Q9JLB9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Nectin3Q9JLB9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Nectin3Q9JLB9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nectin3Q9JLB9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nectin3Q9JLB9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nectin3Q9JLB9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nectin3Q9JLB9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nectin3Q9JLB9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nectin3Q9JLB9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms