Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Raet1eQ9CZQ6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1eQ9CZQ6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1eQ9CZQ6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1eQ9CZQ6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Raet1eQ9CZQ6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Raet1eQ9CZQ6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Raet1eQ9CZQ6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Raet1eQ9CZQ6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Raet1eQ9CZQ6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Raet1eQ9CZQ6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Gm22238-201ENSMUST00000175222 88 ntBASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1eQ9CZQ6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms