Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Gm6365-201ENSMUST00000054711 744 ntBASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb1Q8R3Z5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.46■□□□□ 0.87
Cacnb1Q8R3Z5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb1Q8R3Z5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Gm43377-201ENSMUST00000201640 455 ntBASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb1Q8R3Z5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Gm13313-201ENSMUST00000118938 1084 ntBASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Gm25131-201ENSMUST00000082653 151 ntBASIC20.43■□□□□ 0.86
Cacnb1Q8R3Z5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb1Q8R3Z5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb1Q8R3Z5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cacnb1Q8R3Z5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb1Q8R3Z5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb1Q8R3Z5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb1Q8R3Z5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 CT010486.3-201ENSMUST00000224555 811 ntBASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb1Q8R3Z5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms