Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist3h2bbQ8CGP0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist3h2bbQ8CGP0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist3h2bbQ8CGP0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hist3h2bbQ8CGP0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hist3h2bbQ8CGP0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hist3h2bbQ8CGP0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hist3h2bbQ8CGP0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hist3h2bbQ8CGP0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hist3h2bbQ8CGP0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Hist3h2bbQ8CGP0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms