Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx6Q8C7R7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rfx6Q8C7R7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Gm43017-201ENSMUST00000198296 752 ntBASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Gm45417-201ENSMUST00000209533 758 ntBASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx6Q8C7R7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx6Q8C7R7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx6Q8C7R7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx6Q8C7R7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms