Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf18Q8BM39 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Gm12821-201ENSMUST00000120022 600 ntBASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf18Q8BM39 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Prpf18Q8BM39 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf18Q8BM39 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf18Q8BM39 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Gm27454-201ENSMUST00000185090 204 ntBASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf18Q8BM39 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf18Q8BM39 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms