Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn3bQ8BHK2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scn3bQ8BHK2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Gm15820-201ENSMUST00000201566 728 ntBASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.06■□□□□ 0.32
Scn3bQ8BHK2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn3bQ8BHK2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.04■□□□□ 0.32
Scn3bQ8BHK2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn3bQ8BHK2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Fst-202ENSMUST00000223640 2612 ntBASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Gm22238-201ENSMUST00000175222 88 ntBASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn3bQ8BHK2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn3bQ8BHK2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn3bQ8BHK2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.01■□□□□ 0.31
Scn3bQ8BHK2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn3bQ8BHK2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn3bQ8BHK2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn3bQ8BHK2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn3bQ8BHK2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms