Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc116Q80X53 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc116Q80X53 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc116Q80X53 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc116Q80X53 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc116Q80X53 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc116Q80X53 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc116Q80X53 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc116Q80X53 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Gm42642-201ENSMUST00000200683 355 ntBASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Gm7514-201ENSMUST00000209475 934 ntBASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Gm5874-201ENSMUST00000096101 508 ntBASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc116Q80X53 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc116Q80X53 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Ccdc116Q80X53 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc116Q80X53 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc116Q80X53 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc116Q80X53 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms