Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SgcdP82347 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SgcdP82347 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SgcdP82347 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SgcdP82347 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.95■□□□□ 0.3
SgcdP82347 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.95■□□□□ 0.3
SgcdP82347 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SgcdP82347 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.95■□□□□ 0.3
SgcdP82347 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcdP82347 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.94■□□□□ 0.3
SgcdP82347 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SgcdP82347 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SgcdP82347 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SgcdP82347 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.93■□□□□ 0.3
SgcdP82347 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.93■□□□□ 0.3
SgcdP82347 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.93■□□□□ 0.3
SgcdP82347 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.93■□□□□ 0.3
SgcdP82347 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SgcdP82347 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SgcdP82347 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.93■□□□□ 0.3
SgcdP82347 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SgcdP82347 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SgcdP82347 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SgcdP82347 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SgcdP82347 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SgcdP82347 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SgcdP82347 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SgcdP82347 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SgcdP82347 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SgcdP82347 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SgcdP82347 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.91■□□□□ 0.3
SgcdP82347 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SgcdP82347 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SgcdP82347 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SgcdP82347 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SgcdP82347 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.91■□□□□ 0.3
SgcdP82347 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.91■□□□□ 0.3
SgcdP82347 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.91■□□□□ 0.3
SgcdP82347 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SgcdP82347 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.9■□□□□ 0.3
SgcdP82347 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.9■□□□□ 0.3
SgcdP82347 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SgcdP82347 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.9■□□□□ 0.3
SgcdP82347 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.9■□□□□ 0.3
SgcdP82347 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.9■□□□□ 0.3
SgcdP82347 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SgcdP82347 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SgcdP82347 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SgcdP82347 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SgcdP82347 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SgcdP82347 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SgcdP82347 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.89■□□□□ 0.29
SgcdP82347 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SgcdP82347 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SgcdP82347 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SgcdP82347 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.89■□□□□ 0.29
SgcdP82347 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.89■□□□□ 0.29
SgcdP82347 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.89■□□□□ 0.29
SgcdP82347 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms