Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.02■□□□□ 0.8
VSX2P58304 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VSX2P58304 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VSX2P58304 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VSX2P58304 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VSX2P58304 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
VSX2P58304 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
VSX2P58304 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 AC026185.1-201ENST00000445748 174 ntBASIC20.01■□□□□ 0.79
VSX2P58304 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.01■□□□□ 0.79
VSX2P58304 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.01■□□□□ 0.79
VSX2P58304 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.01■□□□□ 0.79
VSX2P58304 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.01■□□□□ 0.79
VSX2P58304 RAP2CP1-201ENST00000605103 478 ntBASIC20.01■□□□□ 0.79
VSX2P58304 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.01■□□□□ 0.79
VSX2P58304 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSX2P58304 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
VSX2P58304 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VSX2P58304 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20■□□□□ 0.79
VSX2P58304 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20■□□□□ 0.79
VSX2P58304 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VSX2P58304 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VSX2P58304 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20■□□□□ 0.79
VSX2P58304 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20■□□□□ 0.79
VSX2P58304 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
VSX2P58304 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20■□□□□ 0.79
VSX2P58304 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20■□□□□ 0.79
VSX2P58304 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20■□□□□ 0.79
VSX2P58304 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VSX2P58304 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20■□□□□ 0.79
VSX2P58304 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VSX2P58304 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
VSX2P58304 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.99■□□□□ 0.79
VSX2P58304 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
VSX2P58304 PKD1P6-201ENST00000343738 4769 ntBASIC19.99■□□□□ 0.79
VSX2P58304 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.99■□□□□ 0.79
VSX2P58304 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.99■□□□□ 0.79
VSX2P58304 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
VSX2P58304 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.99■□□□□ 0.79
VSX2P58304 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSX2P58304 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VSX2P58304 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VSX2P58304 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
VSX2P58304 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
VSX2P58304 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VSX2P58304 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VSX2P58304 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.98■□□□□ 0.79
VSX2P58304 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
VSX2P58304 AC007322.1-201ENST00000426983 750 ntBASIC19.98■□□□□ 0.79
VSX2P58304 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.98■□□□□ 0.79
VSX2P58304 TERF1P5-201ENST00000477545 1207 ntBASIC19.98■□□□□ 0.79
VSX2P58304 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.98■□□□□ 0.79
VSX2P58304 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.98■□□□□ 0.79
VSX2P58304 AC231657.2-201ENST00000624556 255 ntBASIC19.98■□□□□ 0.79
VSX2P58304 AL024507.2-201ENST00000606070 2574 ntBASIC19.98■□□□□ 0.79
VSX2P58304 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VSX2P58304 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VSX2P58304 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VSX2P58304 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.97■□□□□ 0.79
VSX2P58304 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VSX2P58304 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VSX2P58304 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.97■□□□□ 0.79
VSX2P58304 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
VSX2P58304 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.97■□□□□ 0.79
VSX2P58304 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.97■□□□□ 0.79
VSX2P58304 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VSX2P58304 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.97■□□□□ 0.79
VSX2P58304 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.97■□□□□ 0.79
VSX2P58304 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms