Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AP003097.1-201ENST00000530657 1135 ntBASIC22.1■■□□□ 1.13
CLCN4P51793 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.1■■□□□ 1.13
CLCN4P51793 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.1■■□□□ 1.13
CLCN4P51793 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.1■■□□□ 1.13
CLCN4P51793 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLCN4P51793 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CLCN4P51793 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.09■■□□□ 1.13
CLCN4P51793 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
CLCN4P51793 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.09■■□□□ 1.13
CLCN4P51793 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.09■■□□□ 1.13
CLCN4P51793 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.09■■□□□ 1.13
CLCN4P51793 AC100791.3-201ENST00000617619 330 ntBASIC22.09■■□□□ 1.13
CLCN4P51793 AC073648.6-201ENST00000641589 218 ntBASIC22.09■■□□□ 1.13
CLCN4P51793 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN4P51793 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
CLCN4P51793 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN4P51793 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CLCN4P51793 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CLCN4P51793 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLCN4P51793 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CLCN4P51793 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLCN4P51793 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.08■■□□□ 1.13
CLCN4P51793 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CLCN4P51793 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLCN4P51793 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.08■■□□□ 1.13
CLCN4P51793 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.08■■□□□ 1.13
CLCN4P51793 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.08■■□□□ 1.13
CLCN4P51793 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CLCN4P51793 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.08■■□□□ 1.13
CLCN4P51793 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.08■■□□□ 1.13
CLCN4P51793 CYP2T3P-201ENST00000601990 817 ntBASIC22.08■■□□□ 1.13
CLCN4P51793 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.08■■□□□ 1.13
CLCN4P51793 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CLCN4P51793 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CLCN4P51793 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
CLCN4P51793 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CLCN4P51793 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.07■■□□□ 1.12
CLCN4P51793 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.07■■□□□ 1.12
CLCN4P51793 CDV3P1-201ENST00000471403 739 ntBASIC22.07■■□□□ 1.12
CLCN4P51793 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.07■■□□□ 1.12
CLCN4P51793 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CLCN4P51793 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.07■■□□□ 1.12
CLCN4P51793 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CLCN4P51793 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLCN4P51793 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 AC245052.3-201ENST00000450182 901 ntBASIC22.06■■□□□ 1.12
CLCN4P51793 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CLCN4P51793 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.06■■□□□ 1.12
CLCN4P51793 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN4P51793 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CLCN4P51793 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
CLCN4P51793 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.05■■□□□ 1.12
CLCN4P51793 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.05■■□□□ 1.12
CLCN4P51793 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLCN4P51793 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CLCN4P51793 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CLCN4P51793 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.05■■□□□ 1.12
CLCN4P51793 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.05■■□□□ 1.12
CLCN4P51793 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.05■■□□□ 1.12
CLCN4P51793 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.05■■□□□ 1.12
CLCN4P51793 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.05■■□□□ 1.12
CLCN4P51793 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLCN4P51793 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CLCN4P51793 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
CLCN4P51793 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CLCN4P51793 AL596275.1-201ENST00000423464 877 ntBASIC22.04■■□□□ 1.12
CLCN4P51793 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.04■■□□□ 1.12
CLCN4P51793 RPS2P4-201ENST00000476944 856 ntBASIC22.04■■□□□ 1.12
CLCN4P51793 AC008403.3-201ENST00000598924 454 ntBASIC22.04■■□□□ 1.12
CLCN4P51793 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 AC026471.6-201ENST00000622954 1905 ntBASIC22.04■■□□□ 1.12
CLCN4P51793 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN4P51793 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms