Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC12.03□□□□□ -0.48
Xcl1P47993 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Xcl1P47993 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Xcl1P47993 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC12.02□□□□□ -0.48
Xcl1P47993 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.02□□□□□ -0.48
Xcl1P47993 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Xcl1P47993 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.02□□□□□ -0.49
Xcl1P47993 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Xcl1P47993 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Xcl1P47993 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.02□□□□□ -0.49
Xcl1P47993 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Xcl1P47993 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Xcl1P47993 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.02□□□□□ -0.49
Xcl1P47993 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Xcl1P47993 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Xcl1P47993 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Xcl1P47993 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC12.01□□□□□ -0.49
Xcl1P47993 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.01□□□□□ -0.49
Xcl1P47993 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Xcl1P47993 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Xcl1P47993 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Xcl1P47993 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Xcl1P47993 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Xcl1P47993 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Xcl1P47993 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Xcl1P47993 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Xcl1P47993 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Xcl1P47993 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Xcl1P47993 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms