Protein–RNA interactions for Protein: P09021

Hoxa5, Homeobox protein Hox-A5, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa5P09021 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.48□□□□□ -0.09
Hoxa5P09021 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa5P09021 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa5P09021 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa5P09021 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.48□□□□□ -0.09
Hoxa5P09021 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hoxa5P09021 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hoxa5P09021 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa5P09021 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxa5P09021 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa5P09021 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa5P09021 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxa5P09021 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.47□□□□□ -0.09
Hoxa5P09021 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa5P09021 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Haglr-201ENSMUST00000100000 2085 ntBASIC14.47□□□□□ -0.09
Hoxa5P09021 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.47□□□□□ -0.09
Hoxa5P09021 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa5P09021 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.47□□□□□ -0.09
Hoxa5P09021 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa5P09021 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.47□□□□□ -0.09
Hoxa5P09021 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa5P09021 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa5P09021 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Hoxa5P09021 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxa5P09021 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hoxa5P09021 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxa5P09021 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa5P09021 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa5P09021 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa5P09021 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Hoxa5P09021 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa5P09021 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Hoxa5P09021 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa5P09021 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa5P09021 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa5P09021 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxa5P09021 Gm22238-201ENSMUST00000175222 88 ntBASIC14.44□□□□□ -0.1
Hoxa5P09021 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxa5P09021 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxa5P09021 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxa5P09021 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa5P09021 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms