Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CopeO89079 Gm8493-201ENSMUST00000196881 489 ntBASIC18.93■□□□□ 0.62
CopeO89079 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CopeO89079 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopeO89079 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CopeO89079 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CopeO89079 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.92■□□□□ 0.62
CopeO89079 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CopeO89079 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Gm43173-201ENSMUST00000202246 593 ntBASIC18.92■□□□□ 0.62
CopeO89079 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CopeO89079 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CopeO89079 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.92■□□□□ 0.62
CopeO89079 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopeO89079 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CopeO89079 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CopeO89079 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CopeO89079 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CopeO89079 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CopeO89079 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CopeO89079 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CopeO89079 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.91■□□□□ 0.62
CopeO89079 Gm13241-201ENSMUST00000094493 780 ntBASIC18.91■□□□□ 0.62
CopeO89079 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CopeO89079 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CopeO89079 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.91■□□□□ 0.62
CopeO89079 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CopeO89079 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CopeO89079 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.91■□□□□ 0.62
CopeO89079 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.9■□□□□ 0.62
CopeO89079 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CopeO89079 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CopeO89079 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CopeO89079 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.9■□□□□ 0.62
CopeO89079 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CopeO89079 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CopeO89079 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CopeO89079 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CopeO89079 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.89■□□□□ 0.61
CopeO89079 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CopeO89079 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.89■□□□□ 0.61
CopeO89079 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CopeO89079 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CopeO89079 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Gm21956-201ENSMUST00000179946 522 ntBASIC18.88■□□□□ 0.61
CopeO89079 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CopeO89079 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CopeO89079 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CopeO89079 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.87■□□□□ 0.61
CopeO89079 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CopeO89079 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CopeO89079 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CopeO89079 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CopeO89079 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms