Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Gm43173-201ENSMUST00000202246 593 ntBASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Mir7075-201ENSMUST00000184187 82 ntBASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh1F7BJK1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Gm27454-201ENSMUST00000185090 204 ntBASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh1F7BJK1 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.46■□□□□ 0.22
Pcdh1F7BJK1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh1F7BJK1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Gm8969-201ENSMUST00000199694 526 ntBASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh1F7BJK1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh1F7BJK1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms