Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.6□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms