Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gm8969-201ENSMUST00000199694 526 ntBASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-4-dv10A0A075B651 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-4-dv10A0A075B651 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-4-dv10A0A075B651 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Mir7075-201ENSMUST00000184187 82 ntBASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-4-dv10A0A075B651 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm43173-201ENSMUST00000202246 593 ntBASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms