Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col18a1P39061 Gm12001-201ENSMUST00000121727 913 ntBASIC9.2□□□□□ -0.94
Col18a1P39061 Gm25824-201ENSMUST00000157092 121 ntBASIC9.2□□□□□ -0.94
Col18a1P39061 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC9.2□□□□□ -0.94
Col18a1P39061 Gm25244-201ENSMUST00000178089 132 ntBASIC9.2□□□□□ -0.94
Col18a1P39061 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC9.2□□□□□ -0.94
Col18a1P39061 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Gm20239-201ENSMUST00000196610 982 ntBASIC9.2□□□□□ -0.94
Col18a1P39061 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC9.2□□□□□ -0.94
Col18a1P39061 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC9.2□□□□□ -0.94
Col18a1P39061 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Col18a1P39061 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col18a1P39061 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Col18a1P39061 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.2□□□□□ -0.94
Col18a1P39061 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Col18a1P39061 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Col18a1P39061 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
Col18a1P39061 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col18a1P39061 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Col18a1P39061 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm26289-201ENSMUST00000104169 131 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm25795-201ENSMUST00000104421 132 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm5133-201ENSMUST00000118940 1255 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm12565-201ENSMUST00000119004 649 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Mup-ps28-201ENSMUST00000120686 289 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Col18a1P39061 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm17824-201ENSMUST00000197690 805 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm42886-201ENSMUST00000199214 466 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 AC140409.4-201ENSMUST00000215757 538 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 AC173482.2-201ENSMUST00000224044 750 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 CT009711.4-201ENSMUST00000225685 198 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col18a1P39061 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm37138-201ENSMUST00000194564 2089 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm43497-201ENSMUST00000201137 2316 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Mir700-201ENSMUST00000102169 79 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm7058-201ENSMUST00000119209 902 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm4997-201ENSMUST00000154056 360 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm16139-201ENSMUST00000160015 420 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm5708-201ENSMUST00000196289 886 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 AC157822.1-201ENSMUST00000196643 80 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm18660-201ENSMUST00000199542 629 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm5154-201ENSMUST00000203971 399 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms