Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RN7SKP259-201ENST00000411066 333 ntBASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AL391730.1-201ENST00000413739 921 ntBASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 PNLIPP1-201ENST00000439233 675 ntBASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 ST6GALNAC2P1-201ENST00000451049 836 ntBASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 ABT1P1-201ENST00000511060 821 ntBASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 GLRX-207ENST00000512469 473 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 CSRP1-207ENST00000526256 582 ntTSL 5 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC005225.2-201ENST00000555011 629 ntTSL 2 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC004585.1-201ENST00000578280 1014 ntTSL 5 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC134978.1-201ENST00000579480 788 ntTSL 3 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 ST6GALNAC1-207ENST00000589992 419 ntTSL 2 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC007780.1-204ENST00000592030 773 ntTSL 3 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC011483.1-201ENST00000596021 493 ntBASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 HNRNPCL3-201ENST00000617807 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 FAM170A-207ENST00000620555 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC060814.6-201ENST00000626448 752 ntTSL 3 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 BEST1-201ENST00000378043 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 AC010729.1-201ENST00000413960 1746 ntTSL 3 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 TSPYL4-201ENST00000420283 4180 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 KITLG-201ENST00000228280 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 STPG1-201ENST00000003583 2544 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 COLQ-203ENST00000383788 3005 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 KLK7-205ENST00000595820 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 MOG-218ENST00000376894 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 TTC8-204ENST00000354441 1342 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 NRXN1-203ENST00000378262 1338 ntTSL 2 BASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 GTF2IP20-202ENST00000608760 2046 ntBASIC9.55□□□□□ -0.88
NPIPA3F8WFD2 KIR2DL1-202ENST00000336077 1596 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC097374.1-202ENST00000582835 3329 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 SMG1P3-205ENST00000522480 4262 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TSNAX-DISC1-205ENST00000602962 3557 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 MED23-205ENST00000368068 5233 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC004453.2-201ENST00000624861 2153 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 POTEF-202ENST00000409914 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 IGSF1-203ENST00000370901 1820 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 CD300LF-207ENST00000469092 1825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 MSRB3-201ENST00000308259 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 KCNN2-202ENST00000503706 1457 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC104758.3-204ENST00000567226 1493 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC004893.2-201ENST00000360902 3398 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC026333.3-201ENST00000543611 1731 ntTSL 4 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 HSP90AB6P-201ENST00000426420 1980 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 BABAM2-202ENST00000344773 1852 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TCTN3-201ENST00000265993 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AL096700.1-201ENST00000358001 744 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 GHRH-202ENST00000373611 377 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 MAP3K7CL-204ENST00000399925 692 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 NDUFA3P3-201ENST00000423475 250 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AL391058.1-201ENST00000424736 1029 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AL133553.1-201ENST00000428391 353 ntTSL 3 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 IGKV1D-27-201ENST00000453184 335 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 PFN2-208ENST00000475518 637 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TCL6-210ENST00000495696 789 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TIMM10-203ENST00000525587 486 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TBX5-204ENST00000526441 1050 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 OR5M5P-201ENST00000529703 936 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 ITFG2-AS1-204ENST00000547834 411 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 PTCD2P1-201ENST00000554393 1136 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC007342.2-201ENST00000568878 395 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TMSB15B-206ENST00000569577 663 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 STRADA-209ENST00000578801 1264 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC114689.2-201ENST00000584299 1297 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 BNIP3P34-201ENST00000600724 572 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TMCC1-AS1-202ENST00000604747 413 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC084824.3-201ENST00000620472 856 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC131025.2-201ENST00000622374 422 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AL031719.2-201ENST00000624488 476 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 SRP9-205ENST00000626563 329 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 PCAT14-201ENST00000626825 1077 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC006547.1-201ENST00000628442 550 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AL158175.1-202ENST00000635173 1194 ntTSL 5 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 LINC02204-201ENST00000630447 3206 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 RNPC3-202ENST00000524631 2013 ntAPPRIS ALT1 TSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AL031666.2-201ENST00000599904 2253 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 CATSPER2-203ENST00000396879 3898 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 CX3CR1-205ENST00000541347 3255 ntAPPRIS P1 TSL 4 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TTLL7-201ENST00000260505 7976 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 GSG1-202ENST00000351606 1422 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 HCG22-208ENST00000565192 1675 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 LINC02023-201ENST00000472120 1948 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 FMO1-202ENST00000367750 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 PKD2L2-203ENST00000502810 2185 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 FAM181A-AS1-202ENST00000554742 2402 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 1123 ms