Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.37□□□□□ -1.23
Nkx6-1Q99MA9 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm15925-201ENSMUST00000120641 1881 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Mir669l-201ENSMUST00000103771 98 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm25757-201ENSMUST00000103986 123 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm15739-201ENSMUST00000118049 872 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm15778-201ENSMUST00000118469 608 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm7746-201ENSMUST00000120966 503 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm12692-201ENSMUST00000121092 546 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm15009-201ENSMUST00000121387 322 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm11263-201ENSMUST00000121853 749 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm16471-201ENSMUST00000121940 618 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm2619-202ENSMUST00000166777 651 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm6472-202ENSMUST00000187973 582 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm7115-201ENSMUST00000193706 832 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm31520-201ENSMUST00000203048 733 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm18012-201ENSMUST00000204558 773 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm45198-201ENSMUST00000206796 591 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm45608-201ENSMUST00000210948 389 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm8512-201ENSMUST00000215367 471 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm40853-201ENSMUST00000221342 582 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm9255-201ENSMUST00000223225 581 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 AC154239.2-201ENSMUST00000227859 233 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm43623-201ENSMUST00000199289 2663 ntBASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nkx6-1Q99MA9 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Gm9776-201ENSMUST00000059598 2980 ntBASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Gm26967-201ENSMUST00000182878 2303 ntBASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC7.35□□□□□ -1.23
Nkx6-1Q99MA9 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms