Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Gm13158-201ENSMUST00000122007 736 ntBASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h3Q9Z0Y9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h3Q9Z0Y9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h3Q9Z0Y9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h3Q9Z0Y9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm22325-201ENSMUST00000158904 308 ntBASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nr1h3Q9Z0Y9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Flg-201ENSMUST00000050758 1488 ntBASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm10698-201ENSMUST00000182663 604 ntBASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h3Q9Z0Y9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms