Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 LINC01521-201ENST00000504184 1943 ntBASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX49Q9Y6V7 LINC02228-203ENST00000641970 1355 ntBASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
DDX49Q9Y6V7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.04■■□□□ 1.6
DDX49Q9Y6V7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.03■■□□□ 1.6
DDX49Q9Y6V7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
DDX49Q9Y6V7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
DDX49Q9Y6V7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX49Q9Y6V7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX49Q9Y6V7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX49Q9Y6V7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25■■□□□ 1.59
DDX49Q9Y6V7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25■■□□□ 1.59
DDX49Q9Y6V7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25■■□□□ 1.59
DDX49Q9Y6V7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25■■□□□ 1.59
DDX49Q9Y6V7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25■■□□□ 1.59
DDX49Q9Y6V7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX49Q9Y6V7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX49Q9Y6V7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25■■□□□ 1.59
DDX49Q9Y6V7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
DDX49Q9Y6V7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms