Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc3Q9CWU5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Gm10033-202ENSMUST00000211874 928 ntBASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.66■□□□□ 0.42
Khdc3Q9CWU5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Gm18284-201ENSMUST00000172604 624 ntBASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Khdc3Q9CWU5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.64■□□□□ 0.41
Khdc3Q9CWU5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc3Q9CWU5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc3Q9CWU5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms