Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn1Q9CWM4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Gm8503-201ENSMUST00000118131 455 ntBASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfdn1Q9CWM4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Pfdn1Q9CWM4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfdn1Q9CWM4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn1Q9CWM4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn1Q9CWM4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn1Q9CWM4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn1Q9CWM4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfdn1Q9CWM4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfdn1Q9CWM4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pfdn1Q9CWM4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfdn1Q9CWM4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfdn1Q9CWM4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfdn1Q9CWM4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfdn1Q9CWM4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfdn1Q9CWM4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms