Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
FGD4Q96M96 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
FGD4Q96M96 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.82■■□□□ 1.4
FGD4Q96M96 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.82■■□□□ 1.4
FGD4Q96M96 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.82■■□□□ 1.4
FGD4Q96M96 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.82■■□□□ 1.4
FGD4Q96M96 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.82■■□□□ 1.4
FGD4Q96M96 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.82■■□□□ 1.4
FGD4Q96M96 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.82■■□□□ 1.4
FGD4Q96M96 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.82■■□□□ 1.4
FGD4Q96M96 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.82■■□□□ 1.4
FGD4Q96M96 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.82■■□□□ 1.4
FGD4Q96M96 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
FGD4Q96M96 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.82■■□□□ 1.4
FGD4Q96M96 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
FGD4Q96M96 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 KRT18P29-201ENST00000397031 1267 ntBASIC23.81■■□□□ 1.4
FGD4Q96M96 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.81■■□□□ 1.4
FGD4Q96M96 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
FGD4Q96M96 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.81■■□□□ 1.4
FGD4Q96M96 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.81■■□□□ 1.4
FGD4Q96M96 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
FGD4Q96M96 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
FGD4Q96M96 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FGD4Q96M96 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.81■■□□□ 1.4
FGD4Q96M96 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FGD4Q96M96 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.8■■□□□ 1.4
FGD4Q96M96 KRT17P1-201ENST00000399211 1546 ntBASIC23.8■■□□□ 1.4
FGD4Q96M96 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
FGD4Q96M96 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
FGD4Q96M96 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.8■■□□□ 1.4
FGD4Q96M96 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FGD4Q96M96 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FGD4Q96M96 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
FGD4Q96M96 AL355472.2-201ENST00000422958 438 ntBASIC23.8■■□□□ 1.4
FGD4Q96M96 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
FGD4Q96M96 C11orf96-202ENST00000528572 1834 ntBASIC23.8■■□□□ 1.4
FGD4Q96M96 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FGD4Q96M96 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
FGD4Q96M96 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.79■■□□□ 1.4
FGD4Q96M96 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
FGD4Q96M96 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FGD4Q96M96 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.79■■□□□ 1.4
FGD4Q96M96 ESRRAP1-201ENST00000400596 1257 ntBASIC23.79■■□□□ 1.4
FGD4Q96M96 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.79■■□□□ 1.4
FGD4Q96M96 RPS2P52-201ENST00000469610 820 ntBASIC23.79■■□□□ 1.4
FGD4Q96M96 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.79■■□□□ 1.4
FGD4Q96M96 AC093827.2-201ENST00000512654 315 ntBASIC23.79■■□□□ 1.4
FGD4Q96M96 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
FGD4Q96M96 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
FGD4Q96M96 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FGD4Q96M96 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FGD4Q96M96 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
FGD4Q96M96 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.79■■□□□ 1.4
FGD4Q96M96 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
FGD4Q96M96 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.78■■□□□ 1.4
FGD4Q96M96 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FGD4Q96M96 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
FGD4Q96M96 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.78■■□□□ 1.4
FGD4Q96M96 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FGD4Q96M96 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.78■■□□□ 1.4
FGD4Q96M96 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.78■■□□□ 1.4
FGD4Q96M96 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FGD4Q96M96 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.78■■□□□ 1.4
FGD4Q96M96 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.78■■□□□ 1.4
FGD4Q96M96 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.78■■□□□ 1.4
FGD4Q96M96 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FGD4Q96M96 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
FGD4Q96M96 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
FGD4Q96M96 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
FGD4Q96M96 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.77■■□□□ 1.4
FGD4Q96M96 AC068473.5-201ENST00000616428 2072 ntBASIC23.77■■□□□ 1.4
FGD4Q96M96 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.77■■□□□ 1.4
FGD4Q96M96 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
FGD4Q96M96 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms