Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Gm20049-201ENSMUST00000219950 730 ntBASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdha11Q91Y19 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha11Q91Y19 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha11Q91Y19 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha11Q91Y19 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdha11Q91Y19 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdha11Q91Y19 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdha11Q91Y19 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 BC021767-201ENSMUST00000126387 1716 ntBASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Gm10653-202ENSMUST00000139570 835 ntBASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Gm44549-201ENSMUST00000208351 577 ntBASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdha11Q91Y19 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdha11Q91Y19 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha11Q91Y19 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Gm2559-201ENSMUST00000201323 363 ntBASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha11Q91Y19 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdha11Q91Y19 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms