Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Gm6433-201ENSMUST00000118634 875 ntBASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga6Q91XY2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga6Q91XY2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga6Q91XY2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Gm10231-201ENSMUST00000181584 441 ntBASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Gm10175-202ENSMUST00000208752 441 ntBASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga6Q91XY2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga6Q91XY2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Gm21362-201ENSMUST00000194272 928 ntBASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms